free (w/ or w/o commercial version)… pyCNO 23 Oct 202523 Oct 2025 Python open-source package for Computational Nuclear Oncology PyCNO is an open-source Python package for computational nuclear oncology (CNO). It aims to provide advanced computational tools, including physiologically based pharmacokinetic (PBPK) and…
free (w/ or w/o commercial version)… Dynamic PET 31 Oct 202331 Oct 2023 Dynamic positron emission tomography (PET) analysis Dynamic PET is designed for voxelwise analysis of reconstructed dynamic positron emission tomography (PET) scans, and also supports regional analysis. Dynamic PET provides a command line…
free (w/ or w/o commercial version)… Bloodstream 31 Oct 2023 A PET BIDS blood-processing tool Bloodstream is a simplified and automated pipeline designed for PET studies to process blood data [1,2] in BIDS (Brain Imaging Data Structure) format [3]. The bloodstream package…
free (w/ or w/o commercial version)… Magia 30 Oct 202330 Oct 2023 Automated Brain PET Analysis Pipeline Magia is an automated processing pipeline for brain PET studies. Magia uses FreeSurfer to parcellate the brain into anatomical regions of interest, and performs kinetic…
free (w/ or w/o commercial version)… STARE 29 Oct 202331 Oct 2023 Source-to-Target Automatic Rotating Estimation STARE, Source-to-Target Automatic Rotating Estimation, is a MATLAB package for non-invasive estimation of the net influx rate (Ki) of irreversible Positron Emission Tomography (PET) radiotracers and…
free (w/ or w/o commercial version)… mfEVolve™ 28 Oct 202328 Oct 2023 Research Software for Multi-Tracer PET Imaging and Kinetic Analysis mfEVolve™ is a research-only software tool designed to facilitate multi-tracer and quantitative dynamic PET research studies by providing tools for processing,…
free (w/ or w/o commercial version)… NiftyPAD 26 Oct 202326 Oct 2023 Neuroimaging for the Prevention of Alzheimer's Disease NiftyPAD is a freely available, open source, Python-based software package for the versatile and quantitative analyses of static, full or dual-time window dynamic…
free (w/ or w/o commercial version)… Open KM Initiative 7 Aug 202227 Mar 2023 The Open Kinetic Modeling (OpenKM) Initiative is aimed at opening up more educational opportunities and research resources on tracer kinetic modeling in the technical community of molecular imaging. The OpenKM…
free (w/ or w/o commercial version)… imlook4d 8 Mar 202227 Mar 2023 Imlook4d is a software tool for visualization of medical images (2D), volumes (3D) and time-dependent volumes (4D). Imlook4d is written in Matlab, which means that it has to be installed…
free (w/ or w/o commercial version)… DEPICT 7 Mar 20227 Mar 2022 A Basis Pursuit Kinetic Modelling Software DEPICT (data-driven estimation of parametric images based on compartmental theory) is a software package written in Matlab 6.5 for the analysis of kinetic radiotracer data. The method…
free (w/ or w/o commercial version)… APPIAN 4 Mar 20224 Mar 2022 APPIAN (Automated Pipeline for PET Image ANalysis) is an open-source automated software pipeline for analyzing PET images in conjunction with MRI. The goal of APPIAN is to make PET tracer…
free (w/ or w/o commercial version)… SAKE 3 Mar 20223 Mar 2022 Spectral Analysis Kinetic Estimation (SAKE): an integrated tool for quantification of PET data. SAKE is an open-source software designed for the easy application of spectral analysis in PET kinetic modeling…
free (w/ or w/o commercial version)… Brain PET Sim + Recon 25 Feb 202225 Feb 2022 A C++ & Matlab-based PET simulation and reconstruction software, enabling realistic brain simulations, e.g. dynamic PiB PET imaging, based on the system matrix of the advanced brain-dedicated High Resolution Research…
commercial-only… QUAD (Cedars Sinai Quantitative Diagnostic Software Group) 17 Feb 202217 Feb 2022 The Quantitative Diagnostic Software Group (QUAD) of the Department of Medicine at Cedars-Sinai, USA, seeks to develop software to allow computers to process and analyze three-dimensional images of the heart in…
free (w/ or w/o commercial version)… FIREVOXEL 1 Mar 20213 Jul 2023 FireVoxel is a medical imaging software for analysis and display of medical images. The emphasis is on fitting the kinetic models to the dynamic MRI, CT, PET, and SPECT acquisitions. Also…
free (w/ or w/o commercial version)… QModeling: an Open-Source Toolbox for PET Kinetic Analysis 15 Jun 20206 Nov 2023 QModeling is a multi-platform toolbox for SPM to fit reference-region kinetic models (currently supporting SRTM, SRTM2, Patlak Reference and Logan Reference Plots) to dynamic PET imaging data. The toolbox was…
free (w/ or w/o commercial version)… kinfitr: PET kinetic modeling using R 15 Jun 202012 Aug 2020 kinfitr is a package for PET Kinetic Modelling Using R. The main goal of this package is to equip PET modelers with great flexibility, while simultaneously making it easier to…
free (w/ or w/o commercial version)… Imager-4D: Viewer for dynamic PET studies with integrated Patlak and radiomics analysis 21 Aug 201912 Aug 2020 The Imager-4D is a novel PET viewer that allows the user to view dynamic PET data and to derive dynamic and radiomic parameters from that data. This includes the ability…
commercial-only… PMOD 1 Jan 201912 Aug 2020 Description: PMOD consists of a comprehensive set of user-friendly and powerful tools, each corresponding to a major task involved in image quantification. Due to their smooth interaction, the tools form…
free (w/ or w/o commercial version)… STIR (Software for Tomographic Image Reconstruction) 1 Jan 201912 Aug 2020 Description: STIR is an Open Source software for use in tomographic imaging. Its aim is to provide a Multi-Platform Object-Oriented framework for all data manipulations and corrections in tomographic imaging.…
commercial-only… CVIT (Cardiovascular Imaging Technologies) 1 Jan 201912 Aug 2020 Cardiovascular Imaging Technologies (CVIT) is a provider of cardiac specific research and technology solutions. CVIT offers a suite of software products for quantitative image reconstruction, review, analysis and kinetic modeling.…
free (w/ or w/o commercial version)… FreeSurfer 1 Jan 201918 Oct 2023 FreeSurfer is an open-source software suite for processing and analyzing (human) brain MRI images. It can support Skullstripping, Image Registration, Subcortical Segmentation, Cortical Surface Reconstruction, Cortical Segmentation, Cortical Thickness Estimation,…
commercial-only… SAAM II (Simulation Analysis and Modeling) 1 Jan 201929 Jul 2024 SAAM II is a modeling, simulation, and analysis software package, which supports the development and statistical calibration of compartmental models in biological, metabolic, and pharmaceutical systems. Used worldwide by more…
free (w/ or w/o commercial version)… UCLA Tracer Kinetic Model Fitting (TKMF) Program 1 Jan 201912 Aug 2020 The Tracer Kinetic Model Fitting (TKMF) Program is a server-based tracer kinetic analysis software program that is accessible through the Internet. It provides the general capability of tracer kinetic model…
free (w/ or w/o commercial version)… Carimas 1 Jan 201912 Aug 2020 Carimas is a general medical imaging processing platform developed in Turku PET Centre in Finland. Carimas is for research use only – not for use in diagnostic procedure. Originally, Carimas…
free (w/ or w/o commercial version)… MIAKAT 1 Jan 201912 Aug 2020 MIAKAT™ is a fully quantitative suite of analysis tools for PET neuroimaging data. The software includes functionality for motion correction of dynamic image sequences, neuoranatomical parcellation of regions of interest…
commercial-only… VivoQuant 1 Jan 201912 Aug 2020 VivoQuant® from Invicro is a DICOM compliant post-processing suite for image data combining fundamental viewing functionality with advanced analysis capabilities. VivoQuant® supports data from most imaging modalities including MR, PET, SPECT, CT,…
free (w/ or w/o commercial version)… COMKAT (COmpartment Model Kinetic Analysis Tool) 1 Jan 201912 Aug 2020 COMKAT is a MATLAB software for compartmental modeling oriented to nuclear medicine applications (PET & SPECT). It supports models of a wide range complexity including multiple injection, receptor model with…
free (w/ or w/o commercial version)… Vinci (Volume Imaging in Neurological Research) 1 Jan 201912 Aug 2020 VINCI (“Volume Imaging in Neurological Research”) was designed for the visualization and analysis of volume data generated by medical tomography systems with special emphasis on the needs for brain imaging…
NMMItools 