free (w/ or w/o commercial version)… Brain PET Sim + Recon 25 Feb 202225 Feb 2022 A C++ & Matlab-based PET simulation and reconstruction software, enabling realistic brain simulations, e.g. dynamic PiB PET imaging, based on the system matrix of the advanced brain-dedicated High Resolution Research…
free (w/ or w/o commercial version)… PET Sim & Recon 25 Feb 202221 Mar 2023 A Matlab-based PET simulation and reconstruction framework with analytical modeling of system matrix, capable of incorporating various degrees of spatial resolution's Point Spread Function (PSF) modeling. Synthetic NEMA NU2 true…
commercial-only… QUAD (Cedars Sinai Quantitative Diagnostic Software Group) 17 Feb 202217 Feb 2022 The Quantitative Diagnostic Software Group (QUAD) of the Department of Medicine at Cedars-Sinai, USA, seeks to develop software to allow computers to process and analyze three-dimensional images of the heart in…
free (w/ or w/o commercial version)… OMEGA 1 May 202114 May 2021 OMEGA is an open-source MATLAB/GNU Octave Emission and Transmission Tomography Software. The purpose of OMEGA is twofold. It has been created and maintained by Ville-Veikko Wettenhovi. OMEGA is designed primarily…
free (w/ or w/o commercial version)… Occiput.io (iLang engine) 1 Feb 201927 Jun 2019 Occiput is an Open Source Tomographic reconstruction software for PET, PET-MRI and SPECT in 2D, 3D (volumetric) and 4D (spatio-temporal) in Python, using GPUs. The design of occiput.io makes it…
free (w/ or w/o commercial version)… STIR (Software for Tomographic Image Reconstruction) 1 Jan 201912 Aug 2020 Description: STIR is an Open Source software for use in tomographic imaging. Its aim is to provide a Multi-Platform Object-Oriented framework for all data manipulations and corrections in tomographic imaging.…
free (w/ or w/o commercial version)… EMrecon 1 Jan 201912 Aug 2020 EMrecon is an Expectation Maximization Based Image Reconstruction Framework for Emission Tomography Data. The EMrecon project was started in 2006 as an open reconstruction software for the quadHIDAC wirechamber small animal PET…
free (w/ or w/o commercial version)… NiftyRec Tomography Toolbox 1 Jan 201927 Jun 2019 NiftyRec is a software for tomographic reconstruction, providing the fastest GPU-accelerated reconstruction tools for emission and transmission computed tomography. NiftyRec supports a wide range of modalities: Positron Emission Tomography (PET)…
free (w/ or w/o commercial version)… TIRIUS (Tomographic Image Reconstruction Interface of the Universite de Sherbrooke) 1 Jan 201927 Jun 2019 TIRIUS (Tomographic Image Reconstruction Interface of the Universite de Sherbrooke) is a Qt-based user-interface software for reconstructing 3D images from data generated by real apparatus or generated by the GATE Monte…
free (w/ or w/o commercial version)… ASTRA toolbox 1 Jan 201927 Jun 2019 The ASTRA Toolbox is a MATLAB and Python toolbox of high-performance GPU primitives for 2D and 3D tomography. The supported geometries are 2D parallel, fan beam, as well as 3D…
free (w/ or w/o commercial version)… TomoPy (Tomographic Reconstruction in Python) 1 Jan 201912 Aug 2020 TomoPy is an open-source Python package for tomographic data processing and image reconstruction. It features image reconstruction algorithms for tomography. various filters, ring removal algorithms, phase retrieval algorithms. forward projection operator…
free (w/ or w/o commercial version)… QSPECT 1 Jan 201931 May 2023 QSPECT is an open-source Image Reconstruction application for SPECT data. It includes Maximum Likelihood Expectation Maximization (MLEM) and Ordered Subsets Expectation Maximization (OSEM) as well as a suitable Graphical User Interface…
commercial-only… Hermes Medical Solutions Software 1 Jan 201921 Mar 2023 Hermes Medical Solutions continuously innovates to enable faster and more personalized diagnosis and therapies in molecular imaging and nuclear medicine. For 47 years, we have empowered physicians and healthcare professionals…
commercial-only… CVIT (Cardiovascular Imaging Technologies) 1 Jan 201912 Aug 2020 Cardiovascular Imaging Technologies (CVIT) is a provider of cardiac specific research and technology solutions. CVIT offers a suite of software products for quantitative image reconstruction, review, analysis and kinetic modeling.…
free (w/ or w/o commercial version)… CONRAD 1 Jan 201912 Aug 2020 CONRAD is a software framework for cone-beam imaging in radiology. The software package includes different simulation tools that are able to generate 4-D projection and volume data and respective vector…
free (w/ or w/o commercial version)… AIR tools II – Algebraic Iterative Reconstruction Methods 1 Jan 201912 Aug 2020 AIR tools II is a MATLAB-based package provides efficient, robust and flexible implementations of algebraic iterative reconstruction (AIR) methods for computing regularized solutions to discretize inverse problems, such as computed…
free (w/ or w/o commercial version)… TIGRE (Tomographic Iterative GPU-based Reconstruction) 1 Jan 201927 Jun 2019 TIGRE is a MATLAB and Python/CUDA toolbox for fast and accurate 3D tomographic reconstruction (any geometry), created jointly by University of Bath's Engineering Tomography Lab and CERN. The aim of…
free (w/ or w/o commercial version)… TERSE (transmission and emission reconstruction environment for SPECT) 1 Jan 201912 Aug 2020 TERSE: a transmission and emission reconstruction environment for SPECT, has been developed at the University of Michigan by Jeff Fessler and Edward Ficaro, in a collaboration between the Department of…
free (w/ or w/o commercial version)… ASPIRE (A sparse precomputed iterative reconstruction algorithm) 1 Jan 201927 Jun 2019 ASPIRE (a sparse precomputed iterative reconstruction library) is a collection of ANSI C programs for tomographic image reconstruction developed at the University of Michigan by Jeff Fessler and his students.…
free (w/ or w/o commercial version)… PET-RD-tools 1 Jan 201912 Aug 2020 PET-RD-tools is a collection of command line utilities for PET-MR (pre)-processing. The tools have been designed for validating and extracting raw PET data, and associated files, for the purposes of…
free (w/ or w/o commercial version)… MIRT (Michigan Image Reconstruction Toolbox) 1 Jan 201927 Jun 2019 The Michigan Image Reconstruction Toolbox (MIRT) is a collection of open source algorithms for image reconstruction (and related imaging problems) written in Matlab (MathWorks Inc.) language. This software was developed…
free (w/ or w/o commercial version)… PETstep & dPETstep – (dynamic) PET Simulator of Tracers via Emission Projection 1 Jan 201912 Aug 2020 PETstep is a fast analytic PET simulator designed in MATLAB environment for high throughput simulation of PET images. It allows a full simulation of a user defined activity distributions (objects)…
free (w/ or w/o commercial version)… KesnerDDG – Data-driven respiratory gating of PET list-mode data 1 Jan 201912 Aug 2020 KesnerDDG is research software that can be used for data driven respiratory motion correction in PET imaging. This software was built as a free tool to be available for researchers…
free (w/ or w/o commercial version)… NiftyPET 1 Jan 201912 Aug 2020 NiftyPET is an open source Python package for image reconstruction and analysis with uncertainty estimation as well as support for high-throughput parallel processing using GPU computing. The pipeline of the…
free (w/ or w/o commercial version)… CASToR (Customizable and Advanced Software for Tomographic Reconstruction) 1 Jan 201912 Aug 2020 CASToR is an open-source multi-platform project for 4D emission (PET and SPECT) and transmission (CT) tomographic reconstruction. This platform is a scalable software providing both basic image reconstruction features for…
free (w/ or w/o commercial version)… SIRF (Synergistic Image Reconstruction Framework) for Biomedical Imaging 1 Jan 201912 Aug 2020 The CCP (Collaborative Computational Project) in synergistic image reconstruction for biomedical imaging (SyneRBI), formerly known as CCP PET-MR (Collaborative Computational Project in synergistic PET-MR image reconstruction), project has led to…
NMMItools 