free (w/ or w/o commercial version)… Brain PET Sim + Recon 25 Feb 202225 Feb 2022 A C++ & Matlab-based PET simulation and reconstruction software, enabling realistic brain simulations, e.g. dynamic PiB PET imaging, based on the system matrix of the advanced brain-dedicated High Resolution Research…
free (w/ or w/o commercial version)… PET Sim & Recon 25 Feb 202221 Mar 2023 A Matlab-based PET simulation and reconstruction framework with analytical modeling of system matrix, capable of incorporating various degrees of spatial resolution's Point Spread Function (PSF) modeling. Synthetic NEMA NU2 true…
free (w/ or w/o commercial version)… CERR: Computational Environment for Radiological Research 21 Aug 201931 Mar 2021 CERR (pronounced 'sir'), stands for Computational Environment for Radiological Research. CERR is MATLAB based software platform for developing and sharing research results using radiation therapy treatment planning and imaging informatics.…
free (w/ or w/o commercial version)… ASIM (Analytic PET Simulator) 4 Jun 201927 Jun 2019 ASIM is a software package designed as a fast analytic simulator for positron emission scanners. This process uses a "Monte-Carlo" approach to allow the rapid generation of multiple realizations with…
free (w/ or w/o commercial version)… STIR (Software for Tomographic Image Reconstruction) 1 Jan 201912 Aug 2020 Description: STIR is an Open Source software for use in tomographic imaging. Its aim is to provide a Multi-Platform Object-Oriented framework for all data manipulations and corrections in tomographic imaging.…
free (w/ or w/o commercial version)… EMrecon 1 Jan 201912 Aug 2020 EMrecon is an Expectation Maximization Based Image Reconstruction Framework for Emission Tomography Data. The EMrecon project was started in 2006 as an open reconstruction software for the quadHIDAC wirechamber small animal PET…
free (w/ or w/o commercial version)… MCNP (Monte-Carlo N-Particle) Transport Code 1 Jan 201927 Jun 2019 Description: MCNP is a general-purpose Monte Carlo N-Particle code that can be used for neutron, photon, electron, or coupled neutron/photon/electron transport. Specific areas of application include, but are not limited…
free (w/ or w/o commercial version)… EGS (Electron Gamma Shower) 1 Jan 201927 Jun 2019 Description: The EGS computer code system is a general purpose package for the Monte Carlo simulation of the coupled transport of electrons and photons in an arbitrary geometry for particles…
free (w/ or w/o commercial version)… SIMIND 1 Jan 201912 Aug 2020 Description: SIMIND is a Monte Carlo simulation code supporting the description of standard clinical SPECT cameras which can be easily modified for various types of calculations or measurements encountered in…
free (w/ or w/o commercial version)… GAMoS (Geant4-based Architecture for Medicine-Oriented Simulations) 1 Jan 201927 Jun 2019 Description: GAMOS, the Geant4-based Architecture for Medicine-Oriented Simulations, facilitates the use of Geant4 by providing a simple script language that covers almost all the needs of a nuclear medicine simulation.…
free (w/ or w/o commercial version)… TomoPy (Tomographic Reconstruction in Python) 1 Jan 201912 Aug 2020 TomoPy is an open-source Python package for tomographic data processing and image reconstruction. It features image reconstruction algorithms for tomography. various filters, ring removal algorithms, phase retrieval algorithms. forward projection operator…
free (w/ or w/o commercial version)… PeneloPET 1 Jan 201927 Jun 2019 Description: PeneloPET is a Monte Carlo code capable of performing realistic simulations for pixelated scintillator based PET scanners. It is based on PENELOPE, a toolkit for Monte Carlo Simulation of…
free (w/ or w/o commercial version)… SimSET (Simulation System for Emission Tomography) 1 Jan 201927 Jun 2019 The SimSET package uses Monte Carlo techniques to model the physical processes and instrumentation used in emission imaging. Official Website Source Code: Link 1 & Link 2 Tutorials: Link 1…
free (w/ or w/o commercial version)… FLUKA 1 Jan 201912 Aug 2020 FLUKA is a fully integrated particle physics Monte Carlo simulation package. It has many applications in high energy experimental physics and engineering, shielding, detector and telescope design, cosmic ray studies,…
free (w/ or w/o commercial version)… GATE (Geant4 Application for Tomography Emission) 1 Jan 201917 May 2021 Description: Geant4 Application for Tomography Emission (GATE) is an advanced open-source software developed by the international OpenGATE collaboration and dedicated to numerical simulations in medical imaging and radiotherapy. It currently…
commercial-only… SAAM II (Simulation Analysis and Modeling) 1 Jan 201912 Aug 2020 SAAM II is a modeling, simulation, and analysis software package, which supports the development and statistical calibration of compartmental models in biological, metabolic, and pharmaceutical systems. Used worldwide by more…
free (w/ or w/o commercial version)… CONRAD 1 Jan 201912 Aug 2020 CONRAD is a software framework for cone-beam imaging in radiology. The software package includes different simulation tools that are able to generate 4-D projection and volume data and respective vector…
free (w/ or w/o commercial version)… COMKAT (COmpartment Model Kinetic Analysis Tool) 1 Jan 201912 Aug 2020 COMKAT is a MATLAB software for compartmental modeling oriented to nuclear medicine applications (PET & SPECT). It supports models of a wide range complexity including multiple injection, receptor model with…
free (w/ or w/o commercial version)… PETstep & dPETstep – (dynamic) PET Simulator of Tracers via Emission Projection 1 Jan 201912 Aug 2020 PETstep is a fast analytic PET simulator designed in MATLAB environment for high throughput simulation of PET images. It allows a full simulation of a user defined activity distributions (objects)…
free (w/ or w/o commercial version)… CASToR (Customizable and Advanced Software for Tomographic Reconstruction) 1 Jan 201912 Aug 2020 CASToR is an open-source multi-platform project for 4D emission (PET and SPECT) and transmission (CT) tomographic reconstruction. This platform is a scalable software providing both basic image reconstruction features for…
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